DEVELOPMENT OF SPOT-MAS LIQUID BIOPSY FOR EARLIER MULTI-CANCER DETECTION

Nguyễn Trọng Hiếu1, Phan Thanh Hải2, Phạm Thị Thu Thủy2, Jasmine Thanh Xuân2, Nguyễn Văn Chủ3, Trần Thị Thanh Hương3, Nguyễn Hữu Thịnh4, Trần Đức Huy4, Nguyễn Duy Sinh5, Nguyễn Văn Thiện Chí1, Lương Bắc An6, Cao Văn Thịnh7, Huỳnh Quang Huy8, Đỗ Thị Thanh Thủy1, Trương Đình Kiệt1, Nguyễn Hoài Nghĩa6, Phan Minh Duy1, Giang Hoa1, Trần Lê Sơn1,
1 Medical Genetics Institute, Ho Chi Minh City
2 Medic Medical Center HCMC
3 K Hospital
4 University Medical Center Ho Chi Minh City
5 Nguyen Tat Thanh University
6 Center For Molecular Biomedicine, University of Medicine and Pharmacy at Ho Chi Minh city
7 Tan Tao University
8 Pham Ngoc Thach University of Medicine, Ho Chi Minh City

Main Article Content

Abstract

Background: In 2020, there were 182,563 new cancer cases and 122,690 cancer-related deaths in Viet Nam, the most frequent of which are liver (14.5%), lung (14.4%), breast (11.8%) and colorectal (9.0%) cancers. Multi-cancer early detection could reduce 78% of patients diagnosed with late-stage cancer and decrease 26% of the cancer mortality. In addition, early cancer detection could improve the efficacy of cancer treatment and reduce medical cost. Objective: In this study, we developed a liquid biopsy assay for early multi-cancer detection, known as SPOT-MAS. Method: The SPOT-MAS uniquely combined four features of ctDNA (DNA released from tumor into the bloodstream) including 450 targeted hypermethylation regions, genome-wide hypomethylation, length profile of ctDNA and genome-wide copy number variation and advanced machine learning engine to increase the chance of detecting rare ctDNA in earlier cancer. This combinatorial analysis allows to detect multi-cancer in a single test. The blood samples were collected from 285 cancer patients and 222 healthy subjects. Results: The sensitivity, specificity, positive predictive value and negative predictive value of SPOT-MAS test were 95,9% (95%CI: 95,8-96), 95,4% (95%CI: 95,2-95,3) and 75,7% (95%CI: 74,7-76), respectively. Conclusion: The SPOT-MAS showed excellent performance in detecting earlier multi-cancer from a simple blood draw.

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References

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